Omics4TB Disease Progression

This website serves as a portal for computational modeling program to generate an integrated, predictive gene regulatory network model of host/pathogen interactions by using omics data.

MTB Network Portal Host Network Portal Modeling Framework

The Center for Infectious Disease Research (CIDR) joins Seattle Children’s Research Institute

10/01/2018 - 11:39

On October 1, 2018, The Center for Infectious Disease Research (CIDR) joined Seattle Children’s Research Institute to create a world-class team of researchers working to find viable solutions to infectious diseases that can pose risks to our communities, and disproportionately impact children and those in poverty.

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Omics4TB Workspace at PATRIC

07/21/2017 - 12:22

Data from the Omics4TB project is now included at PATRIC and accessible from the specific workspace.

Omics4TB Workspace at PATRIC

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The Latest Omics 4 TB Publications

Hansen SG, Zak DE, Xu G, Ford JC, Marshall EE, Malouli D, Gilbride RM, Hughes CM, Ventura AB, Ainslie E et al..  2018.  Prevention of tuberculosis in rhesus macaques by a cytomegalovirus-based vaccine.. Nat Med. 24(2):130-143.

Thompson EG, Shankar S, Gideon HP, Braun J, Valvo J, Skinner J, Aderem A, Flynn JAL, Lin PLing, Zak DE.  2018.  Blood RNA signatures prospectively discriminate controllers from progressors early after low-dose M. tuberculosis infection of cynomolgus macaques. :jiy006-jiy006.

Boot M, van Winden VJC, Sparrius M, van de Weerd R, Speer A, Ummels R, Rustad T, Sherman DR, Bitter W.  2017.  Cell envelope stress in mycobacteria is regulated by the novel signal transduction ATPase IniR in response to trehalose.. PLoS Genet. 13(12):e1007131.